Insertion junction: CLIP2.055935_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055935
Chromosome:chromosome 6
Location:3057969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274950 (1 of 1) K18953 - factor associated with neutral sphingomyelinase activation (NSMAF, FAN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGGCCTCGCTGGACCTGCACGACCCAGCCAACTTCAGGTGCGGGCCG
Internal bar code:TCAGCCATTGGCAGGAGCGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:248
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGTAGGCGTGAGTGTG
Suggested primer 2:CTCCCCTTGATCTGCTGCAA