Insertion junction: CLIP2.055947_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055947
Chromosome:chromosome 1
Location:194971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001300 ankryin repeat containing protein; (1 of 1) IPR000782//IPR006626 - FAS1 domain // Parallel beta-helix repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACACTTACGGGGGCGTGAGGGCTGCGTGCTGGACGGAGGTGGGGTTC
Internal bar code:CTGCTAGCTGTAGTTGCCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:886
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGGGATGGGGAGAAGGA
Suggested primer 2:ACATTTGACACGCACACACG