Insertion junction: CLIP2.055955_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055955
Chromosome:chromosome 14
Location:3489920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630650 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGGGGGTGCGGCGGCAGGCGGAACAGCGGGATGGCGCAGCGCCAGC
Internal bar code:CGCGGCTCTTGGGGCATCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1365
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTCCGGAGCTGGTACTG
Suggested primer 2:CGGGTACTTGCTCGTGCTAA