Insertion junction: CLIP2.055958_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055958
Chromosome:chromosome 7
Location:998655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319500 (1 of 2) 2.3.2.15 - Glutathione gamma-glutamylcysteinyltransferase / Phytochelatin synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTCATGGTGCCGTCCAGGAGCGCCTCTTGGAACAGCTGCCGGCCTGTG
Internal bar code:AGGCGTTATTTCAGTAGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAATACATCAAAGCGCGCCC
Suggested primer 2:GGAGGTGAACACGAGCTCAA