Insertion junction: CLIP2.055974_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055974
Chromosome:chromosome 3
Location:6806918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGCGATGGGACAAGAAAAGGGTGGCGAAGTCCCACGATCAGTGCTGC
Internal bar code:CTGCTGGAGGGTATTATGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:275
LEAP-Seq percent confirming:45.9459
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCGCCGCTTCTATTTC
Suggested primer 2:CCTTTGCTCCGACAGGGATT