Insertion junction: CLIP2.055978_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055978
Chromosome:chromosome 10
Location:1503803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428678 GID1,MNMG1,MNMG (1 of 1) K03495 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme (gidA, mnmG, MTO1); tRNA uridine 5-carboxymethylaminomethyl modification enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGGTCGTAGAACCGGCGTGCCCCCGAAAGCCCCTGCCCCTGCCCCG
Internal bar code:CAGGTCGCGCACGAAGGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTTATGGGAGGTGGTGGGTG
Suggested primer 2:GCCACACCACAACATTGCAT