Insertion junction: CLIP2.055987_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055987
Chromosome:chromosome 5
Location:1333085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241655 (1 of 24) IPR001478 - PDZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGGCGTGCGTGAAGCTGGACTTACAGCAGCTGACACGCCGCCACGCG
Internal bar code:ATCGCATAGCTCGATAGGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:59.4595
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCCAACACAAACACGTC
Suggested primer 2:CTCATCACCACCCACCTTCC