Insertion junction: CLIP2.055990_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055990
Chromosome:chromosome 8
Location:4158116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383600 SRR21 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) IPR001190//IPR017448//IPR029062 - SRCR domain // SRCR-like domain // Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGCCGCAGACCTGACGCCGCCGGGCTCGCCGCCGCTGCCCCTGCGCC
Internal bar code:GATTCGGGAGACTACTGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2430
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCTCGACGTTAATGCGC
Suggested primer 2:GCTGACTGAACCGTGTACCA