Insertion junction: CLIP2.056016_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056016
Chromosome:chromosome 3
Location:961314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800290 (1 of 2) IPR011043//IPR013783//IPR014756//IPR015202//IPR015916 - Galactose oxidase/kelch, beta-propeller // Immunoglobulin-like fold // Immunoglobulin E-set // Domain of unknown function DUF1929 // Galactose oxidase, beta-propeller intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGTAAGGGCCCCACCAGCACTTCCGGCACGCACCCTTTAGTGAAGCA
Internal bar code:CACGTGTATAAGCTAGATAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2016
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTTGCAATCAACCAGCA
Suggested primer 2:GCAATGATGATGGGTCGCAC