Insertion junction: CLIP2.056019_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056019
Chromosome:chromosome 2
Location:5992243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118450 DNJ28 (1 of 1) IPR000104//IPR001623//IPR012336 - Antifreeze protein, type I // DnaJ domain // Thioredoxin-like fold; DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACACATGGCAGCAGCGGCAGAACGTGTGATGATCAGCCCCAACTGCTC
Internal bar code:TTCGAATTGAGGGCTTTGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCAGTACGAGTACTACC
Suggested primer 2:ACACACATTCTTGCGGCAAC