Insertion junction: CLIP2.056020_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056020
Chromosome:chromosome 17
Location:3690633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802073 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAGCTGCTGCCGGCGCACCTGCCGGGCGCCTACTGCTACCTGGGCGC
Internal bar code:GAGCAAGGCACGAAAACTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2985
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCATTGACGAGTGTTGCGGA
Suggested primer 2:AAATTGAGCAAACACGCCCC