Insertion junction: CLIP2.056021_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056021
Chromosome:chromosome 7
Location:4586477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00101329

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGACCAACATGTCCGCGCAGCGGCACGATCGGCATCGAATCGACAAC
Internal bar code:CTTCCGAACTGCTATGGATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2152
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCCTCGTCCTGTAAGTT
Suggested primer 2:CTACAAACCGGCCGTCTTCT