Insertion cassette: | CIB2 |
Side of cassette: | 5' |
Strand: | + |
Strain: | CLIP2.056023 |
Chromosome: | chromosome 5 |
Location: | 2421007 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre05.g238650 | PHC5 | (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 5 | 3'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CCCACGCCGCCGCTTCGCCACATCTTCTGAGACAACGGTGCGTGCGCCTT |
Internal bar code: | TATGTGATCCTTCGCTTCTGTA |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 1688 |
LEAP-Seq percent confirming: | 85.7143 |
LEAP-Seq n confirming: | 60 |
LEAP-Seq n nonconfirming: | 10 |
LEAP-Seq n unique pos: | 70 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | GTGGTGGACGAGAAGAAGGG |
Suggested primer 2: | CAGCCTCCTACCTATGCACG |