Insertion junction: CLIP2.056024_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056024
Chromosome:chromosome 10
Location:5057480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454900 PDE29 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGTGATTGCGTCTGTGCTGGCTTGTGGACTATGGCTGTTGTATGTG
Internal bar code:GTCATTACGGCAGGAACGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:67.5676
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGAAAAGGGTGCACTG
Suggested primer 2:AGCACCTACAGCAGCAGATG