Insertion junction: CLIP2.056024_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056024
Chromosome:chromosome 10
Location:5057481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454900 PDE29 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTTCCTTTCAACACAAACACGCTTGCTAGCTGCCGCAGTTTCGCCCA
Internal bar code:CGACCGTTGGCCGGGTTACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACCTACAGCAGCAGATG
Suggested primer 2:GCTTGGAAAAGGGTGCACTG