Insertion junction: CLIP2.056038_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056038
Chromosome:chromosome 10
Location:652315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421950 TEF26 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754); Predicted protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATTGTGGACCACCCGGATATCTTTAAGGATGAGGCCACGGAGAAGAAG
Internal bar code:CTACTTAGTTAGGATAAGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:945
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCCACCTCAAAGCACAC
Suggested primer 2:ACCTGTCAGACGTGAACGAC