Insertion junction: CLIP2.056040_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056040
Chromosome:chromosome 3
Location:4244801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173950 (1 of 3) PF08495 - FIST N domain (FIST) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATTTTCGCACCCGCCCGCTCATCACGCAACGGCCGCCATGACTTGCCG
Internal bar code:TAGGATCATGATAACGCAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2795
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAGAGTGTTGGAGAGC
Suggested primer 2:TTTGAGTCGTGGTCCTTCGG