Insertion junction: CLIP2.056041_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056041
Chromosome:chromosome 13
Location:2501844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579901 DEG6 (1 of 2) PTHR22939:SF67 - PROTEASE DO-LIKE 9; Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCCCCCCCGTAACGCTTCATGTTCCGCAAGATGGTCTACCGTCTACC
Internal bar code:CCTGGCATTTTCATCCTATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:783
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTTCTCGGCGTCCTCAT
Suggested primer 2:CTAAAGGGGGCTTCGCAGAA