Insertion junction: CLIP2.056046_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056046
Chromosome:chromosome 13
Location:4053706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590800 HTA21,HTA37 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTAGGAATAGATTTGCTGGGCCCAGAGGCATTAAATGGGGCTCCCGA
Internal bar code:CGGTAAGAGTAGCGGCCGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2629
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTAGCCCGAGGTGAACT
Suggested primer 2:AGAAGCAGGTTGGCACTACC