Insertion junction: CLIP2.056054_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056054
Chromosome:chromosome 5
Location:3167778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232000 (1 of 1) IPR001623//IPR011989 - DnaJ domain // Armadillo-like helical 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCGCAGCTCGTAACATCTTCAGTTGCTGCACAGAGCTGACACCACCA
Internal bar code:ATCCTTTTAAGCATCCTAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1205
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCACTCCTGTGCCTGTG
Suggested primer 2:CCCAATAATGCGCTGGCTTC