Insertion junction: CLIP2.056066_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056066
Chromosome:chromosome 3
Location:2749928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161363 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGACGTGGCGTGGCGGGGATAGAGCATGGCGGTGCATTGGCATGGTAA
Internal bar code:GTCTTTATAGGGAGGATCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3034
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGCAGAGGTGGGAGAG
Suggested primer 2:TACTAGCTGGGCACAAAGGC