Insertion junction: CLIP2.056069_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056069
Chromosome:chromosome 3
Location:5156979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAACCCATGTGCCTTCAATGCTGTTGTAGCGTTCCAGGGCACGATACG
Internal bar code:TTGTTCTTGAACTGTACCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1448
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAACGTCCGCACTGATGT
Suggested primer 2:GCAATTGCACACACGTCAGT