Insertion junction: CLIP2.056089_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056089
Chromosome:chromosome 2
Location:6633871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389850 (1 of 29) IPR013320 - Concanavalin A-like lectin/glucanase domain 3'UTR
Cre09.g389851 (1 of 274) IPR020683 - Ankyrin repeat-containing domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGGCAACCGCACCGGTGCGGACACCCACTTGCAAGCTGGGAAGATTG
Internal bar code:CTTATGTGAGTGGCGGTTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4509
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGTTTCCATGGCCGTAC
Suggested primer 2:ACACACGGGGTTTGTTGAGT