Insertion junction: CLIP2.056097_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056097
Chromosome:chromosome 1
Location:5662963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040500 (1 of 1) K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) outside_mRNA
Cre01.g800098 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATTGCTTGACACTCAAGCTCGCCTGCTACTCCTTGTGCTGTTTGGGC
Internal bar code:CGGTCCCTTGGAAAAGATATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1284
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACAAGAGCCAGAGTCGC
Suggested primer 2:CAAACATCTAGAAGCGCGCC