Insertion junction: CLIP2.056099_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056099
Chromosome:chromosome 6
Location:364616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g251400 MME6 NADP-dependent malic enzyme 6; (1 of 5) 1.1.1.40 - Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) / Pyruvic-malic carboxylase 5'UTR
Cre06.g251450 NIC7 (1 of 1) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase; Quinolinate synthetase A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACAATTACACGCCGGTTAAGCCCCGCGCCCCCTGCCCTCCTGACCTGT
Internal bar code:CTGCTCAATGTCACGGAAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2114
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCTGTGTTTATGCCCCC
Suggested primer 2:GGTAGGAGGAGGGCAGTGTA