Insertion junction: CLIP2.056112_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056112
Chromosome:chromosome 16
Location:2442538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660050 CMT1B (1 of 2) PTHR12608//PTHR12608:SF7 - TRANSMEMBRANE PROTEIN HTP-1 RELATED // GDT1-LIKE PROTEIN 2, CHLOROPLASTIC; Mn and/or Ca transport 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTTGGCCCCATCCTCAGACAGGTATAAACGTAGCAAGCCTTGCACAAC
Internal bar code:TTCGTAAAGAACGATACGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2209
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCATCAGCGAGAACAGC
Suggested primer 2:CCCTTTTGCCTGCCCAAATC