Insertion junction: CLIP2.056114_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056114
Chromosome:chromosome 2
Location:508742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTTAGAAATGTAGCTGCCGCCCTGGGGTAGTTGCTGGACTCGAATGG
Internal bar code:TGGCCAAATCGCTAGATGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1520
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTGCGGCAGTCAATAC
Suggested primer 2:CTTCGCCTGAGCTACTACCG