Insertion junction: CLIP2.056115_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056115
Chromosome:chromosome 9
Location:4415947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400478 DIV31 phosphatidylinositol 4-phosphate 5-kinase; (1 of 1) PTHR23086:SF8 - PROTEIN PPK-2 3'UTR
Cre09.g400516 (1 of 6) K04710 - ceramide synthetase (CERS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTCGGCCTGTCCCTTCACGGTCCCTTCTTCACACAAGCACACGGATA
Internal bar code:GGAGGATGTTACCCAATCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1949
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGCTTGGTGGAGAAGG
Suggested primer 2:TGATGGAGGGAGGAGGACTG