Insertion junction: CLIP2.056123_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056123
Chromosome:chromosome 3
Location:8234603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGCTGTGTCAACGTGTGACTGTCAACGTGCACTCGGAGCTGGTCTGG
Internal bar code:GTGAGGATGAACGTTAACTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATTTTGCTGGATCCCT
Suggested primer 2:CTCACCTTCAACCAGCTCGT