Insertion junction: CLIP2.056124_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056124
Chromosome:chromosome 9
Location:4116595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399289 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) 3'UTR
Cre09.g399326 MITC3, MCP3 (1 of 2) K15110 - solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21 (SLC25A21, ODC); Mitochondrial substrate carrier protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGATGTGTGTCACGATCCTTCCCACAGTCCCCATCTTTTTCCTGATGC
Internal bar code:GCTCCTTATGGTGTGGGGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2393
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTGGGCGAGGACTAGA
Suggested primer 2:GGAGCCTGTTGAGTTTCGGA