Insertion junction: CLIP2.056124_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056124
Chromosome:chromosome 9
Location:4116597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399289 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) 3'UTR
Cre09.g399326 MITC3, MCP3 (1 of 2) K15110 - solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21 (SLC25A21, ODC); Mitochondrial substrate carrier protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGTCTGGCCTGGGCGCCGATGGGCTGTAACCTGGCTTGGAGATATG
Internal bar code:TTGCTTGTATTCGTCTATGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3605
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCCTGTTGAGTTTCGGA
Suggested primer 2:TGTCTTGGGCGAGGACTAGA