Insertion junction: CLIP2.056126_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056126
Chromosome:chromosome 16
Location:956028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648650 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCCTCCTTGGGGAACACGAGGGAACGGGTCGTGCCTACATGGCTAC
Internal bar code:AGATTTCTGGGGTCTGGGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1466
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGCACGGTATCAACATC
Suggested primer 2:TAATGTTGGACCTGCCCGAC