Insertion junction: CLIP2.056130_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056130
Chromosome:chromosome 12
Location:4705573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522650 (1 of 2) 2.4.1.232 - Initiation-specific alpha-1,6-mannosyltransferase / Glycolipid 6-alpha-mannosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGTTGTCTTGGTCCACCGTCAGTCCAGCCACCACCACACCTCGTGC
Internal bar code:CACTTGAAGCTAGTCAGGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1127
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGACTGCGTGTAGGGCTA
Suggested primer 2:CACTAACAGCGACACCCAGT