Insertion junction: CLIP2.056140_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056140
Chromosome:chromosome 10
Location:3171177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441800 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCACCCCAGCTGACGCGCCGGACTGTTGTACTTTCGGACTGACTAT
Internal bar code:CATTATTTAGCCTATCTGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1436
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGCTCACCAAGTTACAC
Suggested primer 2:TGACAACGCTTGGCCATACT