Insertion junction: CLIP2.056148_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056148
Chromosome:chromosome 5
Location:1140681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248300 NRAMP4 Manganese/metal transporter, NRAMP homolog; (1 of 1) K12347 - natural resistance-associated macrophage protein (SLC11A, NRAMP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGCATGGATACTGAGCGAGTGCAGCCGATGCAAACTGCCATGCACGT
Internal bar code:ATATGTATGATTTGCTTTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:118
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:118

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATCCAGTCGTCCTCCA
Suggested primer 2:AGGATTTGGAGGAGGAGGGG