Insertion junction: CLIP2.056155_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056155
Chromosome:chromosome 6
Location:4669589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278585 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGAATGTGCCGGCTGCCATGGCCGTACGCCCGTACCCGTGCCAGTGC
Internal bar code:AATAAGTGAGTACTGTGACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1662
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTTACACAGCACCGGTT
Suggested primer 2:GGCCGAACGTCACAGATACA