Insertion junction: CLIP2.056157_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056157
Chromosome:chromosome 4
Location:1265305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214900 3'UTR
Cre04.g215001 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGTACAGTTACCCTCTGGCATAGACGCCTTAGGGCTGCCCAAGCCCG
Internal bar code:CGTCGTCTTGCGGTTCATCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:505
LEAP-Seq percent confirming:34.4828
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGACGTAGAAGGGCGAG
Suggested primer 2:CACAGTTTGTGGCGAGTGTG