Insertion junction: CLIP2.056157_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056157
Chromosome:chromosome 4
Location:1265313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214900 3'UTR
Cre04.g215001 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCACCGCATGGAGGAGCATGAGTTTATATTCCACGGCCCTTGAGAAC
Internal bar code:AGTTCCATTAGGGTCAAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1210
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGTTTGTGGCGAGTGTG
Suggested primer 2:GATGGACGTAGAAGGGCGAG