Insertion junction: CLIP2.056159_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056159
Chromosome:chromosome 17
Location:174976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697050 (1 of 4) PF13911 - AhpC/TSA antioxidant enzyme (AhpC-TSA_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGTGCCATGGAATGATGGAAACTTTCCGGAAGGCCCAGCTGCAACAC
Internal bar code:GTAACACAAGACTAGCGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ACATAGAAAAGGGGCTGCCC
Suggested primer 2:CCCGACTCCATTCTACAGGC