Insertion junction: CLIP2.056161_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056161
Chromosome:chromosome 4
Location:3637507
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g228675 (1 of 781) IPR000104 - Antifreeze protein, type I intron
lncRNA_TCONS_00096852 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCCTGGCCCGCCGTTCTGCTCGCGGTTGCACGCGCGCGACCCCATCT
Internal bar code:ATAGGTTTCGAAGAGTCGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCAACAACTGGGAACG
Suggested primer 2:TGGTCCAACGCATGTTACGA