Insertion junction: CLIP2.056174_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056174
Chromosome:chromosome 11
Location:3687956
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g478650 (1 of 6) IPR007577//IPR029044 - Glycosyltransferase, DXD sugar-binding motif // Nucleotide-diphospho-sugar transferases CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCGCCATCCCGCCCAGCAACGCCTCCGCGCTGCAGCCGCACATGTC
Internal bar code:CGGCCTGAACGGAACATGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:311
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTCCTGGTGGTGAATC
Suggested primer 2:GGCATTGGTGTGGTGGGATA