Insertion junction: CLIP2.056179_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056179
Chromosome:chromosome 10
Location:2815574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438850 ROC76 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAACTCACAACTTGACTCAACTCACACGGACAGCAAGCAATAGCAACC
Internal bar code:GATTTTCAGTATAACTCACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCCCTTGTGCTGTTAC
Suggested primer 2:GTCTGAGCCCTGTCAGGAAC