Insertion junction: CLIP2.056182_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056182
Chromosome:chromosome 2
Location:7841994
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g146150 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCCATGCCTTCTGCATGCGTCCCTGCTACCCGCCGCCCGGACCCCCC
Internal bar code:ATTTACAAACTCGCCTAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:466
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGAGGAGGAGGAGGAAG
Suggested primer 2:TTCACCACAGGAGACGAAGC