Insertion junction: CLIP2.056186_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056186
Chromosome:chromosome 9
Location:3275388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395028 (1 of 2) PF02470 - MlaD protein (MlaD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCGTCCCAGGCGTTCGGGTAGCGTTGGGTTTACGCTTACGGCGTCAT
Internal bar code:CTTTCGAGTCTATATTCACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2680
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAGGGAAGGAGGATTGC
Suggested primer 2:GGCGTGGGCACTTCATTTTT