Insertion junction: CLIP2.056189_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056189
Chromosome:chromosome 17
Location:5011743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735850 (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAAGCGGTGCCAGGGCCTTGTCGACCTGCACCGATGATAGCTTGGC
Internal bar code:TCAGGGGTTCTTGTGGCGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1098
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCACAGACAGGCAGCTG
Suggested primer 2:AACAAACACGAACTCGCAGC