Insertion junction: CLIP2.056199_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056199
Chromosome:chromosome 2
Location:1138195
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g080850 CYN47,CYN11 Cyclophilin 47; (1 of 1) IPR003582//IPR029000 - ShKT domain // Cyclophilin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGTCACAGTACGGTACCTCGACTCAGGCCCGCAGACTTATCCCCGGC
Internal bar code:CTCTTGCAACGATAGTATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5299
LEAP-Seq percent confirming:1.47059
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGTACTACTGGCTGTT
Suggested primer 2:AGAAGCAACACGCACGTTTC