Insertion junction: CLIP2.056203_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056203
Chromosome:chromosome 2
Location:1630056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085200 (1 of 12) PF01585 - G-patch domain (G-patch) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCACAGATGCCCCCGGTCGGCTGGACAGGGACAGCCCGCTGGCGTGGG
Internal bar code:TTGGATGGTAGGCAGGCGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1359
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGACTTGTTGCACGTCC
Suggested primer 2:ATTGTGTGTCGCGGTTGTTG