Insertion junction: CLIP2.056216_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056216
Chromosome:chromosome 3
Location:705607
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g145847 (1 of 93) 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAAGGGAGGCTGGCAGCCGCAGCAGCAGTTGCAGCAGACGGGCCAGC
Internal bar code:TTTCTTCCTGTGGCATCGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTGCGTCTGTGTGTTG
Suggested primer 2:CTCCTCGAACTCCCTTGCTG