Insertion junction: CLIP2.056239_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056239
Chromosome:chromosome 6
Location:1163507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258150 (1 of 1) PTHR14659:SF1 - ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCTGCAGGCCGGCCCCGTCACATCTCCACCGGGCAGCTGCCCACTT
Internal bar code:TTCACGGCAGTTCAAGTACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:799
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGGGCTCTTGGAATCG
Suggested primer 2:AGATTCGTGGGTCAGCAGTG