Insertion junction: CLIP2.056241_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056241
Chromosome:chromosome 6
Location:8269732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306850 HEL31 (1 of 1) K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGGCGCAAGGGCCACGGGTGCACAGCCGCGGGGGTGGCCACTGGCC
Internal bar code:TATTCATTGTGACGCTCTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2962
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCTACTCGCATTCCCCT
Suggested primer 2:GGGATGACGAGGACGAGTTC